Package: localhierarchy 0.91

Leontine Alkema

localhierarchy: An R package to facilitate fitting of global and local Bayesian hierarchical models

The localhierarchy package implements a flexible set up to estimate parameters hierarchically and to carry out local model fits, whereby higher-level parameters are fixed.

Authors:Leontine Alkema [aut, cre], Shauna Mooney [aut], Evan Ray [aut], Herbert Susmann [aut]

localhierarchy_0.91.tar.gz
localhierarchy_0.91.zip(r-4.7)localhierarchy_0.91.zip(r-4.6)localhierarchy_0.91.zip(r-4.5)
localhierarchy_0.91.tgz(r-4.6-any)localhierarchy_0.91.tgz(r-4.5-any)
localhierarchy_0.91.tar.gz(r-4.7-any)localhierarchy_0.91.tar.gz(r-4.6-any)
localhierarchy_0.91.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
localhierarchy/json (API)

# Install 'localhierarchy' in R:

install.packages('localhierarchy', repos = c('https://alkemalab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/alkemalab/localhierarchy/issues

Pkgdown/docs site:https://alkemalab.github.io

On CRAN:

3.15 score 12 exports 56 dependencies

Last updated from:5cc0bf1d4c. Checks:7 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	WARNING	154
source / vignettes	OK	223
linux-release-x86_64	WARNING	152
macos-release-arm64	WARNING	122
macos-oldrel-arm64	WARNING	93
windows-devel	WARNING	112
windows-release	WARNING	96
windows-oldrel	WARNING	118
wasm-release	OK	119

Exports:check_nas fit_model_localhierarchy get_geo_unit_index_data get_posterior_summaries_localhierarchy hierarchical_data hierarchical_model_matrix hierarchical_param_stan_data plot_muraw_localhierarchy plot_posterior_summaries_localhierarchy plot_prior_post_sigmas_localhierarchy posterior_summary_hierparam_localhierarchy simulate_multilevel_data

Dependencies:abind arrayhelpers backports bit bit64 checkmate cli clipr coda cpp11 crayon distributional dplyr farver generics ggdist ggplot2 glue gtable hms isoband labeling lattice lifecycle magrittr matrixStats numDeriv pillar pkgconfig posterior prettyunits progress purrr quadprog R6 RColorBrewer Rcpp readr rlang S7 scales stringi stringr svUnit tensorA tibble tidybayes tidyr tidyselect truncnorm tzdb utf8 vctrs viridisLite vroom withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Check for missing values	check_nas
Fit localhierarchy example model	fit_model_localhierarchy
Get unique hierarchical levels from survey data	get_geo_unit_index_data
Get posterior summaries for use in local models	get_posterior_summaries_localhierarchy
Create hierarchical data structure for a hierarchical model.	hierarchical_data
Hierarchical model matrix	hierarchical_model_matrix
Stan data for hierarchical parameters	hierarchical_param_stan_data
Plot prior and posterior densities of location parameters	plot_muraw_localhierarchy
Plot summaries of hierarchical parameters	plot_posterior_summaries_localhierarchy
Plot prior and posteriors of sigmas from hierarchical models	plot_prior_post_sigmas_localhierarchy
Calculate posterior summaries for hierarchical parameters	posterior_summary_hierparam_localhierarchy
Simulate multilevel data	simulate_multilevel_data